This paper introduces a new Subgraph GNN framework to address these issues.

Technically,various methods of both categories exploit the link between graph data and linear algebra by representing graphs by their (normalized) adjacency matrix. Such methods are often defined or can be interpreted in terms ofwalks. On the other hand, the Weisfeiler-Leman heuristic for graph isomorphism testing has attracted great interest in machine learning [33, 34].

This paper introduces a new Subgraph GNN framework to address these issues.

Image datasets such as MNIST are a key benchmark for testing Graph Neural Network (GNN) architectures. The images are traditionally represented as a grid graph with each node representing a pixel and edges connecting neighboring pixels (vertically and horizontally). The graph signal is the values (intensities) of each pixel in the image. The graphs are commonly used as input to graph neural networks (e.g., Graph Convolutional Neural Networks (Graph CNNs) [1, 2], Graph Attention Networks (GAT) [3], GatedGCN [4]) to classify the images. In this work, we improve the accuracy of downstream graph neural network tasks by finding alternative graphs to the grid graph and superpixel methods to represent the dataset images, following the approach in [5, 6]. We find row correlation, column correlation, and product graphs for each image in MNIST and Fashion-MNIST using correlations between the pixel values building on the method in [5, 6]. Experiments show that using these different graph representations and features as input into downstream GNN models improves the accuracy over using the traditional grid graph and superpixel methods in the literature.

Graph learning, or network inference, is a prominent problem in graph signal processing (GSP). GSP generalizes the Fourier transform to non-Euclidean domains, and graph learning is pivotal to applying GSP when these domains are unknown. With the recent prevalence of multi-way data, there has been growing interest in product graphs that naturally factorize dependencies across different ways. However, the types of graph products that can be learned are still limited for modeling diverse dependency structures. In this paper, we study the problem of learning a Kronecker-structured product graph from smooth signals. Unlike the more commonly used Cartesian product, the Kronecker product models dependencies in a more intricate, non-separable way, but posits harder constraints on the graph learning problem. To tackle this non-convex problem, we propose an alternating scheme to optimize each factor graph and provide theoretical guarantees for its asymptotic convergence. The proposed algorithm is also modified to learn factor graphs of the strong product. We conduct experiments on synthetic and real-world graphs and demonstrate our approach's efficacy and superior performance compared to existing methods.

Subgraph Graph Neural Networks (Subgraph GNNs) enhance the expressivity of message-passing GNNs by representing graphs as sets of subgraphs. They have shown impressive performance on several tasks, but their complexity limits applications to larger graphs. Previous approaches suggested processing only subsets of subgraphs, selected either randomly or via learnable sampling. However, they make suboptimal subgraph selections or can only cope with very small subset sizes, inevitably incurring performance degradation. This paper introduces a new Subgraph GNNs framework to address these issues. We employ a graph coarsening function to cluster nodes into super-nodes with induced connectivity. The product between the coarsened and the original graph reveals an implicit structure whereby subgraphs are associated with specific sets of nodes. By running generalized message-passing on such graph product, our method effectively implements an efficient, yet powerful Subgraph GNN. Controlling the coarsening function enables meaningful selection of any number of subgraphs while, contrary to previous methods, being fully compatible with standard training techniques. Notably, we discover that the resulting node feature tensor exhibits new, unexplored permutation symmetries. We leverage this structure, characterize the associated linear equivariant layers and incorporate them into the layers of our Subgraph GNN architecture. Extensive experiments on multiple graph learning benchmarks demonstrate that our method is significantly more flexible than previous approaches, as it can seamlessly handle any number of subgraphs, while consistently outperforming baseline approaches.

Processing multidomain data defined on multiple graphs holds significant potential in various practical applications in computer science. However, current methods are mostly limited to discrete graph filtering operations. Tensorial partial differential equations on graphs (TPDEGs) provide a principled framework for modeling structured data across multiple interacting graphs, addressing the limitations of the existing discrete methodologies. In this paper, we introduce Continuous Product Graph Neural Networks (CITRUS) that emerge as a natural solution to the TPDEG. CITRUS leverages the separability of continuous heat kernels from Cartesian graph products to efficiently implement graph spectral decomposition. We conduct thorough theoretical analyses of the stability and over-smoothing properties of CITRUS in response to domain-specific graph perturbations and graph spectra effects on the performance. We evaluate CITRUS on well-known traffic and weather spatiotemporal forecasting datasets, demonstrating superior performance over existing approaches.